Genetic Informatics Laboratory • Kawamoto Group

Research on utilization of biological resource and database

Faculty



Research Summary

In the field of life science, innovative technologies such as genome sequencing and genome editing give rise to new findings day after day. In order to advance research and facilitate new findings, the effective utilization of bio-resources and databases play a critical role. Our laboratory has been working in research and development of databases and information retrieval system for the national bio-resource project(NBRP) and integrated database project for life science. We are continuing to improve the quality of databases and study to make use of biological resources.

National BioResource Project web portal. Information of biological resources provided in Japan can be obtained.

Publications

Katayama, T., Wilkinson, M.D., Aoki-Kinoshita, K.F., Kawashima, S., Yamamoto, Y., Yamaguchi, A., Okamoto, S., Kawano, S., Kim, J.D., Wang, Y., Wu, H., Kano, Y., Ono, H., Bono. H., Kocbek, S., Aerts, J., Akune, Y., Antezana, E., Arakawa, K., Aranda, B., Baran, J., Bolleman, J., Bonnal, R.J., Buttigieg, P.L., Campbell, M.P., Chen, Y.A., Chiba, H., Cock, P.J., Cohen, K.B., Constantin, A., Duck, G., Dumontier, M., Fujisawa, T., Fujiwara, T., Goto, N., Hoehndorf, R., Igarashi, Y., Itaya, H., Ito, M., Iwasaki, W., Kalaš, M., Katoda, T., Kim, T., Kokubu, A., Komiyama, Y., Kotera, M., Laibe, C., Lapp, H., Lütteke, T., Marshall, M.S., Mori, T., Mori, H., Morita, M., Murakami, K., Nakao, M., Narimatsu, H., Nishide, H., Nishimura, Y., Nystrom-Persson, J., Ogishima, S., Okamura, Y., Okuda, S., Oshita, K., Packer, N.H., Prins, P., Ranzinger, R., Rocca-Serra, P., Sansone, S., Sawaki, H., Shin, S.H., Splendiani, A., Strozzi, F., Tadaka, S., Toukach, P., Uchiyama, I., Umezaki, M., Vos, R., Whetzel, P.L., Yamada, I., Yamasaki, C., Yamashita, R., York, W.S., Zmasek, C.M., Kawamoto, S., and Takagi, T. (2014). BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. J biomed semantics 5, 5.

Kawamoto, S., and Bono, H. (2008). Portal services of life science database project in Japan. Tanpakushitsu kakusan koso 53, 281-287.


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