2013/05/07

Transcription factors interfering with dedifferentiation induce cell type-specific transcriptional profiles

Division of Molecular and Developmental Biology・Kawakami Group

Transcription factors interfering with dedifferentiation induce cell type-specific transcriptional profiles
Takafusa Hikichi, Ryo Matoba, Takashi Ikeda, Akira Watanabe, Takuya Yamamoto, Satoko Yoshitake, Miwa Tamura-Nakano, Takayuki Kimura, Masayoshi Kamon, Mari Shimura, Koichi Kawakami, Akihiko Okuda, Hitoshi Okochi, Takafumi Inoue, Atsushi Suzuki, and Shinji Masui
PNAS, 2013 Apr 16;110(16):6412-6417. DOI: 10.1073/pnas.1220200110

Transcription factors (TFs) are able to regulate differentiation related processes, including dedifferentiation and direct conversion, through the regulation of cell type-specific transcriptional profiles. However, the functional interactions between the TFs regulating different transcriptional profiles are not well understood. Here, we show that the TFs capable of inducing cell type-specific transcriptional profiles prevent the dedifferentiation induced by TFs for pluripotency. Of the large number of TFs expressed in a neural lineage cell line, we identified a subset of TFs that, when overexpressed, strongly interfered with the dedifferentiation triggered by the procedure to generate induced pluripotent stem cells. This interference occurred through a maintenance mechanism of the cell type-specific transcriptional profile. Strikingly, the maintenance activity of the interfering TF set was strong enough to induce the cell line-specific transcriptional profile when overexpressed in a heterologous cell type. Our results suggest that dedifferentiation suppresses a cell type-specific transcriptional profile, which is primarily maintained by a small subset of TFs capable of inducing direct conversion. We anticipate that this functional correlation might be applicable in various cell types and might facilitate the identification of TFs with induction activity in efforts to understand differentiation.

Figure1

NPC (neural progenitor) cells are dedifferentiated by introduction of OSKM. This dedifferentiation was inhibited by expression n of NPC-specific transcription factors.


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