| Comparative Genomics Laboratory • Fujiyama Group Comparative Genomics Research toward Understanding Diversity and Idiosyncrasy of Life Systems |
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| Professor FUJIYAMA, Asao afujiyam Project Associate Professor TOYODA, Atsushi atoyoda |
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Genomic information is one of the most basic and reliable data that can be used to conduct basic research to explain various biological phenomena as well as many applied sciences such as medicine, pharmaco-genomics, agriculture, ecology or production of bio-materials. |
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| Hongoh, Y., Sharma, V.K., Prakash, T., Noda ,S., Toh, H., Taylor, T., Kudo, T., Sakaki, Y., Toyoda, A., Hattori, M., and Ohkuma, M. (2008). Genome of an endosymbiont coupling N2 fixation to cellulolysis withinprotist cells in termite gut. Science 322, 1108-1109. Putnam, N.H., Butts, T., Ferrier, D.E., Furlong, R.F., Hellsten, U., Kawashima, T., Robinson-Rechavi, M., Shoguchi, E., Terry, A., Yu, J.K., Benito-Gutierrez, E.L., Dubchak, I., Garcia-Fernandez, J., Gibson- Brown, J.J., Grigoriev, I.V., Horton, A.C., de Jong, P.J., Jurka, J., Kapitonov, V.V., Kohara, Y., Kuroki, Y., Lindquist, E., Lucas, S., Osoegawa, K., Pennacchio, L.A., Salamov, A.A., Satou, Y., Sauka-Spengler, T., Schmutz, J., Shin-I, T., Toyoda, A., Bronner-Fraser, M., Fujiyama, A., Holland, L.Z., Holland, P.W., Satoh, N., Rokhsar, D.S. (2008). The amphioxus genome and the evolution of the chordate karyotype. Nature 453, 1064-1071. STAR Consortium; including Fujiyama, A. Kuroki, Y., Sakaki, Y., Serikawa, T., Tatsumoto, S., and Toyoda, A. (2008). SNP and haplotype mapping for genetic analysis in the rat. Nat Genet. 40, 560-566. Watanabe, T., Totoki, Y., Toyoda, A., Kaneda, M., Kuramochi-Miyagawa, S., Obata, Y., Chiba, H., Kohara, Y., Kono, T., Nakano, T., Surani, M.A., Sakaki, Y., and Sasaki, H.(2008). Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes. Nature 453, 539-543. Sato, S., Hirakawa, H., Isobe, S., Fukai, E., Watanabe, A., Kato, M., Kawashima, K., Minami, C., Muraki, A., Nakazaki, N., Takahashi, C., Nakayama, S., Kishida, Y., Kohara, M., Yamada, M., Tsuruoka, H., Sasamoto, S., Tabata, S., Aizu, T., Toyoda, A., Shin-I, T., Minakuchi, Y., Kohara, Y., Fujiyama, A., Tsuchimoto, S., Kajiyama, S., Makigano, E., Ohmido, N., Shibagaki, N., Cartagena, J.A., Wada, N., Kohinata, T., Atefeh, A., Yuasa, S., Matsunaga, S., and Fukui, K. (2010). Sequence Analysis of the Genome of an Oil-Bearing Tree, Jatropha curcas L. DNA Res. [Epub ahead of print]. Shang, W.H., Hori, T., Toyoda, A., Kato, J., Popendorf, K., Sakakibara, Y., Fujiyama, A., and Fukagawa, T. (2010). Chickens possess centromeres with both extended tandem repeats and short non-tandemrepetitive sequences. Genome Res. 9, 1219-28. Nishito, Y., Osana, Y., Hachiya, T., Popendorf, K., Toyoda, A., Fujiyama, A., Itaya, M., and Sakakibara, Y. (2010). Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data. BMC Genomics. 11, 243. |
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